R version 4.0.3 (2020-10-10)
Platform: x86_64-pc-linux-gnu (64-bit)
Running under: Debian GNU/Linux bullseye/sid
Matrix products: default
BLAS: /usr/lib/x86_64-linux-gnu/openblas-pthread/libblas.so.3
LAPACK: /usr/lib/x86_64-linux-gnu/openblas-pthread/libopenblasp-r0.3.10.so
locale:
[1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C
[3] LC_TIME=en_US.UTF-8 LC_COLLATE=en_US.UTF-8
[5] LC_MONETARY=en_US.UTF-8 LC_MESSAGES=en_US.UTF-8
[7] LC_PAPER=en_US.UTF-8 LC_NAME=C
[9] LC_ADDRESS=C LC_TELEPHONE=C
[11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C
attached base packages:
[1] parallel stats graphics grDevices utils datasets methods
[8] base
other attached packages:
[1] psych_2.0.9 magrittr_1.5 ggbio_1.38.0
[4] BiocGenerics_0.36.0 msigdbr_7.2.1 ggpubr_0.4.0
[7] Signac_1.0.0 Seurat_3.2.2 reticulate_1.16
[10] purrr_0.3.4 data.table_1.13.2 cowplot_1.1.0
[13] ggplot2_3.3.2 MOFA2_0.99.6
loaded via a namespace (and not attached):
[1] rappdirs_0.3.1 SnowballC_0.7.0
[3] rtracklayer_1.50.0 pbdZMQ_0.3-4
[5] GGally_2.0.0 tidyr_1.1.2
[7] bit64_4.0.5 knitr_1.30
[9] irlba_2.3.3 DelayedArray_0.16.0
[11] rpart_4.1-15 RCurl_1.98-1.2
[13] AnnotationFilter_1.14.0 generics_0.0.2
[15] GenomicFeatures_1.42.0 RSQLite_2.2.1
[17] RANN_2.6.1 future_1.20.1
[19] bit_4.0.4 spatstat.data_1.4-3
[21] xml2_1.3.2 httpuv_1.5.4
[23] SummarizedExperiment_1.20.0 assertthat_0.2.1
[25] xfun_0.18 hms_0.5.3
[27] evaluate_0.14 promises_1.1.1
[29] progress_1.2.2 readxl_1.3.1
[31] dbplyr_2.0.0 tmvnsim_1.0-2
[33] igraph_1.2.6 DBI_1.1.0
[35] htmlwidgets_1.5.2 reshape_0.8.8
[37] stats4_4.0.3 ellipsis_0.3.1
[39] RSpectra_0.16-0 corrplot_0.84
[41] dplyr_1.0.2 backports_1.1.10
[43] biomaRt_2.46.0 deldir_0.2-2
[45] MatrixGenerics_1.2.0 vctrs_0.3.4
[47] Biobase_2.50.0 Cairo_1.5-12.2
[49] ensembldb_2.14.0 ROCR_1.0-11
[51] abind_1.4-5 withr_2.3.0
[53] BSgenome_1.58.0 checkmate_2.0.0
[55] sctransform_0.3.1 GenomicAlignments_1.26.0
[57] prettyunits_1.1.1 mnormt_2.0.2
[59] goftest_1.2-2 cluster_2.1.0
[61] IRdisplay_0.7.0 lazyeval_0.2.2
[63] crayon_1.3.4 labeling_0.3
[65] pkgconfig_2.0.3 GenomeInfoDb_1.26.0
[67] nlme_3.1-149 vipor_0.4.5
[69] ProtGenerics_1.22.0 nnet_7.3-14
[71] rlang_0.4.8 globals_0.13.1
[73] lifecycle_0.2.0 miniUI_0.1.1.1
[75] BiocFileCache_1.14.0 rsvd_1.0.3
[77] dichromat_2.0-0 cellranger_1.1.0
[79] ggrastr_0.2.1 polyclip_1.10-0
[81] matrixStats_0.57.0 lmtest_0.9-38
[83] graph_1.68.0 Matrix_1.2-18
[85] ggseqlogo_0.1 IRkernel_1.1.1.9000
[87] carData_3.0-4 Rhdf5lib_1.10.1
[89] zoo_1.8-8 base64enc_0.1-3
[91] beeswarm_0.2.3 ggridges_0.5.2
[93] pheatmap_1.0.12 png_0.1-7
[95] viridisLite_0.3.0 bitops_1.0-6
[97] KernSmooth_2.23-17 Biostrings_2.58.0
[99] blob_1.2.1 stringr_1.4.0
[101] qvalue_2.22.0 parallelly_1.21.0
[103] jpeg_0.1-8.1 rstatix_0.6.0
[105] S4Vectors_0.28.0 ggsignif_0.6.0
[107] scales_1.1.1 memoise_1.1.0
[109] plyr_1.8.6 ica_1.0-2
[111] zlibbioc_1.36.0 compiler_4.0.3
[113] RColorBrewer_1.1-2 fitdistrplus_1.1-1
[115] Rsamtools_2.6.0 XVector_0.30.0
[117] listenv_0.8.0 patchwork_1.0.1
[119] pbapply_1.4-3 htmlTable_2.1.0
[121] Formula_1.2-4 MASS_7.3-53
[123] mgcv_1.8-33 tidyselect_1.1.0
[125] stringi_1.5.3 forcats_0.5.0
[127] askpass_1.1 latticeExtra_0.6-29
[129] ggrepel_0.8.2 grid_4.0.3
[131] VariantAnnotation_1.36.0 fastmatch_1.1-0
[133] tools_4.0.3 future.apply_1.6.0
[135] rio_0.5.16 rstudioapi_0.11
[137] uuid_0.1-4 foreign_0.8-80
[139] lsa_0.73.2 gridExtra_2.3
[141] farver_2.0.3 Rtsne_0.15
[143] digest_0.6.25 BiocManager_1.30.10
[145] shiny_1.5.0 Rcpp_1.0.5
[147] GenomicRanges_1.42.0 car_3.0-10
[149] broom_0.7.2 later_1.1.0.1
[151] RcppAnnoy_0.0.16 OrganismDbi_1.32.0
[153] httr_1.4.2 AnnotationDbi_1.52.0
[155] biovizBase_1.38.0 colorspace_1.4-1
[157] XML_3.99-0.5 tensor_1.5
[159] IRanges_2.24.0 splines_4.0.3
[161] uwot_0.1.8 RBGL_1.66.0
[163] RcppRoll_0.3.0 spatstat.utils_1.17-0
[165] plotly_4.9.2.1 xtable_1.8-4
[167] jsonlite_1.7.1 spatstat_1.64-1
[169] R6_2.4.1 Hmisc_4.4-1
[171] pillar_1.4.6 htmltools_0.5.0
[173] mime_0.9 glue_1.4.2
[175] fastmap_1.0.1 BiocParallel_1.24.0
[177] codetools_0.2-16 lattice_0.20-41
[179] tibble_3.0.4 curl_4.3
[181] ggbeeswarm_0.6.0 leiden_0.3.4
[183] zip_2.1.1 openxlsx_4.2.3
[185] openssl_1.4.3 survival_3.2-7
[187] repr_1.1.0 munsell_0.5.0
[189] rhdf5_2.32.4 GenomeInfoDbData_1.2.4
[191] HDF5Array_1.16.1 haven_2.3.1
[193] reshape2_1.4.4 gtable_0.3.0
